Objective 1:
Earth formation hypothesis (1b)
Abiotic formation, accumulation of small
organics (1c)
Formation of organic polymers from the
ancient oceans (1c)
Snowball Earth(optional)
More Snowball Earth (optional)
Even more on Snowball Earth - Was it dotted with puddles? (optional)
Objective 2:
Protocells, coacervate droplets, proteinoid
microspheres (2a)
More on protocells(optional)
An RNA world, ribozymes (2c)
Scientists
Debate RNA's Role at Beginning of Life on Earth(optional)
Was
DNA invented by viruses?(optional)
Objective 3:
Timeline of life
Exploring Life's Origins(optional)
Objective 5:
Modes of attack, infection: plant
viruses v. bacteriophages v. animal viruses (5b)
Retroviruses & Why is
HIV / AIDS so deadly? (5c) (optional)
How do viruses leave
host cells? (5d)
Objective 6:
Anti-viral drugs, why don't viruses respond to antibiotics?
Viruses found to use "hive intelligence" (optional)
Objective 8:
Prion animation
Centers for Disease Control and Prevention BSE information
Making Sense of Mad Cow
Disease (optional)
BSE and vCJD:
Instant Expert (optional)
Creutzfeldt-Jakob disease: Virus or prion? (optional)
Objective 12:
The evolution of complex biochemical pathways
Which came
first, cyclic or linear photophosphorylation? Why was the evolution
of autotrophic
pathways necessary for life to continue? (12 e and f)
What is meant by the term oxygen revolution? (12f)
Objective 15:
Another beneficial use of bacteria: Anti-depressant?(optional)
Objective 16:
Enodsymbiosis
and the origin of Eukaryotes(optional)
SLIDES - Optional
Virus and Bacteria Slides
Slide Descriptions
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Protocells
WHAT DID THE EARLY PROTOCELLS LOOK LIKE? We shall probably never
know for sure; but investigators are able to manufacture complex droplets which
have many of the attributes of living cells and may resemble the early protocells.
The photograph below shows Oparin’s coacervate droplets.
Each droplet is a cluster of macromolecules surrounded by a shell of water
in which the individual
water molecules are rigidly oriented relative to the macromolecules. Such droplets
have a tendency to selectively adsorb and incorporate various substances from
the surrounding medium.
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COACERVATES, polymer-rich colloidal droplets, have been
studied in the Moscow laboratory of A. I. Oparin because of their conjectural
resemblance to prebiological entities. These coacervates are droplets formed
in an aqueous solution of protamine and polyadenylic acid. Oparin has found
that droplets survive longer if they can carry out polymerization reactions. |
Sidney Fox’s proteinoid microspheres are formed by heating
dry mixtures of amino acids to moderate temperatures, then cooling the mixture.
The microspheres show many of the characteristics of living cells.
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PROTEINOID MICROSPHERES, another kind of microspheroidal aggregate, studied
by Sidney W. Fox of the University of Miami, forms from “thermal
proteinoid,” a
polymer produced by heating dry mixtures of amino acids to moderate temperatures.
Under suitable conditions thermal proteinoid will form microspheres several
micrometers in diameter, which grow slowly and eventually bud. The microspheres
seem to have a two-layer membrane suggestive of that in bacteria. |
Oparin has reported another self-growing system in which the coacervate
droplets are made from histone and RNA. The enzyme RNA polymerase is introduced
into the droplets, and ADP is added to the surrounding medium as “food.” When
the ADP enters the droplet, it encounters the RNA polymerase and is polymerized
into polyadenylic acid. The energy for polymerization is contained within the
ADP itself. The new polyadenylic acid adds to the total RNA in the coacervates.
The droplets grow with time and break up into daughter droplets.
Such systems eventually wind down because the supply of enzyme molecules for
polymerizing ADP does not increase with the total mass of the coacervate droplets.
As we saw earlier, however, nucleic acids can be polymerized nonenzymatically
with small, energy-rich coupling-agent molecules such as cyanogen. It should
be possible to construct coacervate droplets from protein and RNA, to provide
them with ADP and the appropriate coupling reagents, and to see them grow and
multiply without limit as long as their “nutrients” continue to
be supplied.

POLYMERIZATION INSIDE A COACERVATE DROPLET causes the wall of the
droplet to thicken and the droplet to grow. The droplet, consisting of protein
and polysaccharide, contains the enzyme phosphorylase. Glucose-1-phosphate
diffuses into the droplet and is polymerized to starch by the enzyme. The starch
migrates to the wall and increases volume of droplet.

TWO-STEP REACTION takes place inside a protein-carbohydrate droplet
provided with two enzymes. One enzyme, phosphorylase, polymerizes glucose-1-phosphate
to starch. The second enzyme, amylase, degrades the starch to maltose. Droplets
in this instance do not grow because the starch disappears as fast as it is
made. The maltose diffuses back into surrounding medium.
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