BioG 1105-1106 at Cornell University
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Unit 3: Demos

Objective 3:

AMP v. ADP v. ATP

Objective 4:

Enzymes
Induced Fit (Carboxypeptidase)

Objective 5:

The Active Site of Carboxypetidase (for more see below)

Objective 10:

Chemiosmosis Video
Chemiosmosis handout

Objective 12:

Chemiosmosis Video
F1 complex (12c)
Animation of the F1complex

Objective 13:

Why do our muscles hurt after exercise? (optional)

Objective 14:

ATP challenge: 6-carbon fatty acid vs. glucose

Objective 16:

Endothermic v. ectothermic
Hot-weather Hibernators (optional)

Objective 17:

Temperature, size, and metabolic rate
For All Creatures Great and Small, One Model Predicts Metabolic Rate (optional)

Optional Supplementary Material:

More on carboxypeptidase 1, 2
Where do all those ATP come from?
Energy changes in endergonic reactions
Enzymes promote catalysis by different mechanisms
NADH AND FADH are generated during the oxidation of glucose
Why are 2.5 ATP produced from each NADH...?

ATP Challenge: 6-carbon fatty acid vs. glucose

A 6-carbon fatty acid has more “stored energy” than glucose (also 6 carbons) because fat metabolism will break the fatty acid into 3, 2-carbon acetyl CoA molecules, while glycolysis breaks glucose into just 2 acetyl CoAs and wastes 2 carbons in forming CO2. In producing the 3 acetyl CoAs, fatty acid metabolism also yields 1 NADH and 1 FADH2 for every pair of carbons in the fatty acid. These are fed into the electron transport chain like normal and result in the production of extra ATP by the fatty acid. The breakdown of fatty acids into acetyl CoA is called β-oxidation and occurs in the mitochondria. Interestingly, studies have shown that grizzly bears depend solely on β-oxidation of stored fats to maintain their body heat and to produce energy for other body functions during their long period of winter sleep. No wonder bears work so hard to find and consume fatty foods before winter hits!

The accounting looks like this:

  Glucose Fatty acid
Glycolysis

2 ATP (substrate)
2 NADH (= 3 ATP)

None
Acetyl CoA production 2 NADH (= 5 ATP)
2 Acetyl CoA
3 NADH (= 7.5 ATP)
3 FADH2 (= 4.5 ATP)
3 Acetyl CoA
Krebs 2 ATP (substrate)
2 Turns
6 NADH (= 15 ATP)
2 FADH2 (= 3 ATP)
3 ATP (substrate)
3 Turns
9 NADH (= 22.5 ATP)
3 FADH2 (= 4.5 ATP)
GRAND TOTAL 30 ATP 42 ATP
  5 ATP/carbon 7 ATP/carbon
40% more ATP per molecule
© BIOG 1105-1106